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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.5.2 (Release date: Sun Jan 29 10:33:12 2023 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: accurate and versatile sequence motif discovery",
Bioinformatics, Mar. 24, 2021.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.252 C 0.248 G 0.248 T 0.252 

MOTIF 1-AYCCACCGTHYGYB STREME-1
letter-probability matrix: alength= 4 w= 14 nsites= 749 E= 4.5e-011
 0.560238 0.070135 0.147858 0.221769
 0.201682 0.499637 0.037005 0.261676
 0.000054 0.999840 0.000053 0.000054
 0.000054 0.829861 0.170032 0.000054
 0.659885 0.000053 0.082824 0.257238
 0.007444 0.733789 0.103516 0.155251
 0.000054 0.886029 0.003009 0.110908
 0.008922 0.081346 0.906722 0.003010
 0.140469 0.163252 0.137513 0.558766
 0.243936 0.229766 0.085781 0.440517
 0.084303 0.389397 0.116820 0.409481
 0.071000 0.093170 0.685014 0.150816
 0.170030 0.240976 0.155866 0.433129
 0.102040 0.262284 0.215853 0.419823

MOTIF 2-ACGCACGCAHGYG STREME-2
letter-probability matrix: alength= 4 w= 13 nsites= 68 E= 1.1e-001
 0.839285 0.040295 0.119937 0.000483
 0.040303 0.839280 0.106661 0.013756
 0.095951 0.080115 0.823451 0.000483
 0.027029 0.746358 0.040295 0.186318
 0.759637 0.053568 0.146492 0.040303
 0.000483 0.865824 0.080115 0.053579
 0.040303 0.013748 0.918920 0.027029
 0.013756 0.733085 0.040295 0.212864
 0.836733 0.066841 0.016303 0.080123
 0.252676 0.334887 0.053568 0.358868
 0.119951 0.000475 0.865818 0.013756
 0.080123 0.295062 0.119935 0.504881
 0.199610 0.159755 0.494146 0.146490

MOTIF 3-CCAGMAGRGGGCR STREME-3
letter-probability matrix: alength= 4 w= 13 nsites= 48 E= 2.1e-001
 0.000863 0.973704 0.000848 0.024584
 0.000863 0.997426 0.000848 0.000863
 0.902554 0.000848 0.000848 0.095750
 0.000863 0.214353 0.783921 0.000863
 0.380581 0.546543 0.000848 0.072028
 0.997440 0.000848 0.000848 0.000863
 0.024584 0.000848 0.973704 0.000863
 0.665289 0.000848 0.333000 0.000863
 0.000863 0.000848 0.997426 0.000863
 0.000863 0.000848 0.997426 0.000863
 0.000863 0.024570 0.855086 0.119481
 0.119481 0.831365 0.024570 0.024584
 0.570374 0.000848 0.427915 0.000863

MOTIF 4-AGGAAG STREME-4
letter-probability matrix: alength= 4 w= 6 nsites= 264 E= 2.3e-001
 0.932009 0.022536 0.022536 0.022918
 0.022918 0.022536 0.931627 0.022918
 0.022918 0.022536 0.931627 0.022918
 0.932009 0.022536 0.022536 0.022918
 0.932009 0.022536 0.022536 0.022918
 0.022918 0.022536 0.931627 0.022918

MOTIF 5-AWTWAWT STREME-5
letter-probability matrix: alength= 4 w= 7 nsites= 471 E= 1.2e+000
 0.742122 0.025926 0.088308 0.143644
 0.314565 0.008577 0.053651 0.623208
 0.000697 0.000685 0.020535 0.978083
 0.460875 0.039125 0.039125 0.460875
 0.978083 0.020535 0.000685 0.000697
 0.623208 0.053651 0.008577 0.314565
 0.143644 0.088308 0.025926 0.742122

MOTIF 6-TAATCCCAGCAC STREME-6
letter-probability matrix: alength= 4 w= 12 nsites= 43 E= 1.7e+000
 0.183679 0.050178 0.025530 0.740614
 0.874100 0.099474 0.000882 0.025544
 0.898748 0.050178 0.000882 0.050192
 0.050192 0.074826 0.050178 0.824804
 0.000896 0.923382 0.000882 0.074840
 0.000896 0.888507 0.025530 0.085067
 0.099489 0.898734 0.000882 0.000896
 0.948044 0.000882 0.000882 0.050192
 0.000896 0.000882 0.997326 0.000896
 0.025544 0.898734 0.000882 0.074840
 0.849452 0.000882 0.025530 0.124137
 0.232965 0.494119 0.074835 0.198081

MOTIF 7-CCACAGGGTGGC STREME-7
letter-probability matrix: alength= 4 w= 12 nsites= 45 E= 3.5e+000
 0.065203 0.697017 0.194051 0.043729
 0.000781 0.954722 0.022242 0.022255
 0.997683 0.000768 0.000768 0.000781
 0.000781 0.988760 0.009678 0.000781
 0.795482 0.052626 0.043716 0.108177
 0.258555 0.022242 0.589492 0.129711
 0.000781 0.022242 0.954722 0.022255
 0.129677 0.000768 0.847300 0.022255
 0.065203 0.022242 0.043716 0.868839
 0.108159 0.022242 0.782922 0.086677
 0.022255 0.043716 0.890300 0.043729
 0.043729 0.847344 0.065199 0.043729

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Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05).
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COMMAND:	streme --verbosity 1 --oc GSM4160247-ETO--BTZ_WO_meme-chip/streme_out -dna --p GSM4160247-ETO--BTZ_WO_meme-chip/seqs-centered --minw 6 --maxw 15 --order 2 --thresh 0.05 --totallength 4000000
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CPU:		snode023.sibcb.ac.cn
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FINALTIME:	32.81 seconds
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