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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.5.2 (Release date: Sun Jan 29 10:33:12 2023 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: accurate and versatile sequence motif discovery",
Bioinformatics, Mar. 24, 2021.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.238 C 0.262 G 0.262 T 0.238 

MOTIF 1-MRRSCRGAGGRWVGN STREME-1
letter-probability matrix: alength= 4 w= 15 nsites= 1293 E= 6.6e-040
 0.349128 0.408175 0.150622 0.092076
 0.552327 0.066897 0.352082 0.028694
 0.472790 0.027820 0.416865 0.082524
 0.078182 0.576654 0.338187 0.006977
 0.000030 0.999907 0.000033 0.000030
 0.346528 0.000033 0.653409 0.000030
 0.096417 0.000033 0.903520 0.000030
 0.975591 0.000033 0.024347 0.000030
 0.000030 0.000901 0.999039 0.000030
 0.000030 0.006980 0.980804 0.012187
 0.482862 0.053871 0.361640 0.101628
 0.391670 0.092079 0.080792 0.435458
 0.233626 0.285231 0.334357 0.146786
 0.154966 0.077325 0.724261 0.043448
 0.294419 0.199758 0.299989 0.205834

MOTIF 2-ATTTCA STREME-2
letter-probability matrix: alength= 4 w= 6 nsites= 589 E= 2.1e-002
 0.996631 0.001157 0.001157 0.001055
 0.001055 0.001157 0.158629 0.839159
 0.041197 0.001157 0.128931 0.828714
 0.136452 0.001157 0.119606 0.742785
 0.001055 0.846304 0.001157 0.151484
 0.777723 0.001157 0.036579 0.184541

MOTIF 3-CCCTAACCCTAACCC STREME-3
letter-probability matrix: alength= 4 w= 15 nsites= 88 E= 1.8e-001
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.023773 0.023773 0.930773
 0.930773 0.023773 0.023773 0.021682
 0.930773 0.023773 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.023773 0.023773 0.930773
 0.930773 0.023773 0.023773 0.021682
 0.930773 0.023773 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682
 0.021682 0.932864 0.023773 0.021682

MOTIF 4-AAAGTACCCAAGGA STREME-4
letter-probability matrix: alength= 4 w= 14 nsites= 46 E= 1.5e+000
 0.997570 0.000834 0.000834 0.000761
 0.997570 0.000834 0.000834 0.000761
 0.975454 0.022950 0.000834 0.000761
 0.177716 0.045067 0.776456 0.000761
 0.000761 0.199906 0.000834 0.798499
 0.997570 0.000834 0.000834 0.000761
 0.111341 0.621635 0.155674 0.111350
 0.000761 0.931295 0.000834 0.067109
 0.111341 0.887063 0.000834 0.000761
 0.975454 0.000834 0.000834 0.022877
 0.909106 0.000834 0.022950 0.067109
 0.244065 0.000834 0.732224 0.022877
 0.000761 0.089299 0.842831 0.067109
 0.909106 0.067183 0.022950 0.000761

MOTIF 5-AATGGAGGAGCTAGA STREME-5
letter-probability matrix: alength= 4 w= 15 nsites= 35 E= 1.5e+000
 0.966646 0.001134 0.031186 0.001034
 0.996698 0.001134 0.001134 0.001034
 0.001034 0.031186 0.031186 0.936594
 0.001034 0.001134 0.996798 0.001034
 0.061138 0.031186 0.906642 0.001034
 0.996698 0.001134 0.001134 0.001034
 0.031086 0.001134 0.966746 0.001034
 0.001034 0.001134 0.996798 0.001034
 0.966646 0.031186 0.001134 0.001034
 0.001034 0.031186 0.846537 0.121243
 0.001034 0.996798 0.001134 0.001034
 0.001034 0.001134 0.001134 0.996698
 0.936594 0.031186 0.031186 0.001034
 0.061138 0.031186 0.906642 0.001034
 0.966646 0.001134 0.001134 0.031086

MOTIF 6-CTATAGGTGGAACA STREME-6
letter-probability matrix: alength= 4 w= 14 nsites= 34 E= 1.5e+000
 0.034236 0.897169 0.001249 0.067347
 0.001139 0.034346 0.001249 0.963267
 0.996364 0.001249 0.001249 0.001139
 0.001139 0.001249 0.001249 0.996364
 0.996364 0.001249 0.001249 0.001139
 0.001139 0.034346 0.930279 0.034236
 0.034236 0.001249 0.930279 0.034236
 0.067333 0.001249 0.001249 0.930169
 0.034236 0.001249 0.963376 0.001139
 0.001139 0.001249 0.996474 0.001139
 0.963267 0.034346 0.001249 0.001139
 0.930156 0.001249 0.001249 0.067347
 0.001139 0.963376 0.001249 0.034236
 0.996364 0.001249 0.001249 0.001139

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Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05).
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COMMAND:	streme --verbosity 1 --oc GSM4160266-WT_ETO_ExoT_only_meme-chip/streme_out -dna --p GSM4160266-WT_ETO_ExoT_only_meme-chip/seqs-centered --minw 6 --maxw 15 --order 2 --thresh 0.05 --totallength 4000000
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CPU:		snode027.sibcb.ac.cn
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FINALTIME:	22.65 seconds
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