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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE115092
PMID:
30654749
Technique Type:
ChIP-seq
Publication:
SNP-ChIP: a versatile and tag-free method to quantify changes in protein binding across the genome
First Author:
Luis A Vale-Silva
Last Author:
Andreas Hochwagen
Year:
2019
Journal:
BMC Genomics
Access Link:
Samples ( 23 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM3164970-WT_Input _rep1 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3164972-WT_Input_rep2 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3164974-WT_Input_rep3 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165004-ycs4S_RED1_Input_rep1 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165006-ycs4S_RED1_Input_rep2 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165008-red1_RED1_Input_rep1 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165010-red1_RED1_Input_rep2 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165012-ycs4S_ycs4S_Input_rep1 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165014-ycs4S_ycs4S_Input_rep2 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165016-ycs4S_red1_Input_rep1 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165018-ycs4S_red1_Input_rep2 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165020-WT_Input_rep4 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165021-WT_anti-gH2AX_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM3165022-ycs4S_RED1_Input_rep3 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165023-ycs4S_RED1_anti-gH2AX_ChIP | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM3165024-red1_RED1_Input_rep3 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165025-red1_RED1_anti-gH2AX_ChIP | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM3165026-ycs4S_ycs4S_Input_rep3 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165027-ycs4S_ycs4S_anti-gH2AX_ChIP | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM3165028-ycs4S_red1_Input_rep3 | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165029-ycs4S_red1_anti-gH2AX_ChIP | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (anti-γH2AX) | |
| GSM3165030-spo11-Y135F_Input | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (Input) | |
| GSM3165031-spo11-Y135F_anti-gH2AX_ChIP | / | Saccharomyces cerevisiae | / | / | / | / | / | ChIP-seq (anti-γH2AX) |
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