DNA Damage Atlas



Basic Information

Dataset ID:

  GSE117541


PMID:

  30502957


Technique Type:

  ChIP-seq


Publication:

  Genomic Analysis of DNA Double-Strand Break Repair in Escherichia coli


First Author:

  A M Mahedi Hasan


Last Author:

  David R F Leach


Year:

  2018


Journal:

  Methods in Enzymology


Access Link:   

Samples ( 8 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM3302818-DL4184_biological_repeat_1_RecA_ChIP/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ::pal246 cynX::GmR lacIq lacZX-///ChIP-seq (anti-RecA)
GSM3302819-DL4184_biological_repeat_2_RecA_ChIP/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ::pal246 cynX::GmR lacIq lacZX-///ChIP-seq (anti-RecA)
GSM3302820-DL4184_biological_repeat_1_RecA_Input/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ::pal246 cynX::GmR lacIq lacZX-///ChIP-seq (Input)
GSM3302821-DL4184_biological_repeat_2_RecA_Input/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ::pal246 cynX::GmR lacIq lacZX-///ChIP-seq (Input)
GSM3302822-DL4201_biological_repeat_1_RecA_ChIP/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ+ cynX::GmR lacIq lacZX-///ChIP-seq (anti-RecA)
GSM3302823-DL4201_biological_repeat_2_RecA_ChIP/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ+ cynX::GmR lacIq lacZX-///ChIP-seq (anti-RecA)
GSM3302824-DL4201_biological_repeat_1_RecA_Input/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ+ cynX::GmR lacIq lacZX-///ChIP-seq (Input)
GSM3302825-DL4201_biological_repeat_2_RecA_Input/Escherichia coli/BW27784 lacZ::XXX mhpR::XXX proA::ISceIcs tsx::ISceIcs PBAD-sbcDC lacZ+ cynX::GmR lacIq lacZX-///ChIP-seq (Input)


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