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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE133558
PMID:
31495565
Technique Type:
HydEn-seq
Publication:
DNA Polymerase Delta Synthesizes Both Strands during Break-Induced Replication
First Author:
Roberto A Donnianni
Last Author:
Lorraine S Symington
Year:
2019
Journal:
Molecular Cell
Access Link:
Samples ( 56 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM3912065-BIR_rnh202_12hr_NT_1 | / | Saccharomyces cerevisiae | NT | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912066-BIR_rnh202_24hr_NT_1 | / | Saccharomyces cerevisiae | NT | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912067-BIR_pol1YA_rnh202_12hr_NT_1 | / | Saccharomyces cerevisiae | NT | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912068-BIR_pol1YA_rnh202_24hr_NT_1 | / | Saccharomyces cerevisiae | NT | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912069-BIR_pol2MG_rnh202_12hr_NT_1 | / | Saccharomyces cerevisiae | NT | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912070-BIR_pol2MG_rnh202_24hr_NT_1 | / | Saccharomyces cerevisiae | NT | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912071-BIR_pol3LG_rnh202_12hr_NT_1 | / | Saccharomyces cerevisiae | NT | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912072-BIR_pol3LG_rnh202_24hr_NT_1 | / | Saccharomyces cerevisiae | NT | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912073-BIR_rnh202_12hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912074-BIR_rnh202_24hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912075-BIR_pol1YA_rnh202_12hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912076-BIR_pol1YA_rnh202_24hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912077-BIR_pol2MG_rnh202_12hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912078-BIR_pol2MG_rnh202_24hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912079-BIR_pol3LG_rnh202_12hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912080-BIR_pol3LG_rnh202_24hr_RII_1 | / | Saccharomyces cerevisiae | RNase HII | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912097-rnh202_0hr_NT | / | Saccharomyces cerevisiae | NT | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912098-rnh202_6hr_NT | / | Saccharomyces cerevisiae | NT | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912099-rnh202_12hr_NT | / | Saccharomyces cerevisiae | NT | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912100-rnh202_24hr_NT | / | Saccharomyces cerevisiae | NT | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912101-pol1YA_rnh202_0hr_NT | / | Saccharomyces cerevisiae | NT | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912102-pol1YA_rnh202_6hr_NT | / | Saccharomyces cerevisiae | NT | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912103-pol1YA_rnh202_12hr_NT | / | Saccharomyces cerevisiae | NT | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912104-pol1YA_rnh202_24hr_NT | / | Saccharomyces cerevisiae | NT | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912105-pol2MG_rnh202_0hr_NT | / | Saccharomyces cerevisiae | NT | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912106-pol2MG_rnh202_6hr_NT | / | Saccharomyces cerevisiae | NT | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912107-pol2MG_rnh202_12hr_NT | / | Saccharomyces cerevisiae | NT | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912108-pol2MG_rnh202_24hr_NT | / | Saccharomyces cerevisiae | NT | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912109-pol3LM_rnh202_0hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912110-pol3LM_rnh202_6hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912111-pol3LM_rnh202_12hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912112-pol3LM_rnh202_24hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912113-pol3LG_rnh202_0hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912114-pol3LG_rnh202_6hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912115-pol3LG_rnh202_12hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912116-pol3LG_rnh202_24hr_NT | / | Saccharomyces cerevisiae | NT | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912117-rnh202_0hr_RII | / | Saccharomyces cerevisiae | RNase HII | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912118-rnh202_6hr_RII | / | Saccharomyces cerevisiae | RNase HII | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912119-rnh202_12hr_RII | / | Saccharomyces cerevisiae | RNase HII | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912120-rnh202_24hr_RII | / | Saccharomyces cerevisiae | RNase HII | rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912121-pol1YA_rnh202_0hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912122-pol1YA_rnh202_6hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912123-pol1YA_rnh202_12hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912124-pol1YA_rnh202_24hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol1-Y869A rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912125-pol2MG_rnh202_0hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912126-pol2MG_rnh202_6hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912127-pol2MG_rnh202_12hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912128-pol2MG_rnh202_24hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol2-M644G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912129-pol3LM_rnh202_0hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912130-pol3LM_rnh202_6hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912131-pol3LM_rnh202_12hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912132-pol3LM_rnh202_24hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612M rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912133-pol3LG_rnh202_0hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912134-pol3LG_rnh202_6hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912135-pol3LG_rnh202_12hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq | |
| GSM3912136-pol3LG_rnh202_24hr_RII | / | Saccharomyces cerevisiae | RNase HII | pol3-L612G rnh202Δ | / | / | HO cleavage | HydEn-seq |
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