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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE145911
PMID:
32690696
Technique Type:
CPD-seq
Publication:
Genome-wide role of Rad26 in promoting transcription-coupled nucleotide excision repair in yeast chromatin
First Author:
Mingrui Duan
Last Author:
Peng Mao
Year:
2020
Journal:
PANS
Access Link:
Samples ( 18 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM4339204-no_UV | / | Saccharomyces cerevisiae | NT | WT | / | / | / | CPD-seq | |
| GSM4339205-rad26_UV_0hr | / | Saccharomyces cerevisiae | UV | RAD26 deletion | / | / | / | CPD-seq | |
| GSM4339206-rad26_UV_2hr | / | Saccharomyces cerevisiae | UV | RAD26 deletion | / | / | / | CPD-seq | |
| GSM4339207-rad26_UV_0hr_repeat | / | Saccharomyces cerevisiae | UV | RAD26 deletion | / | / | / | CPD-seq | |
| GSM4339208-rad26_UV_2hr_repeat | / | Saccharomyces cerevisiae | UV | RAD26 deletion | / | / | / | CPD-seq | |
| GSM4339209-WT_UV_0hr | / | Saccharomyces cerevisiae | UV | WT | / | / | / | CPD-seq | |
| GSM4339210-WT_UV_2hr | / | Saccharomyces cerevisiae | UV | WT | / | / | / | CPD-seq | |
| GSM4339211-Rad26_K328R_UV_0hr | / | Saccharomyces cerevisiae | UV | Rad26 ATPase-dead mutant | / | / | / | CPD-seq | |
| GSM4339212-Rad26_K328R_UV_1hr | / | Saccharomyces cerevisiae | UV | Rad26 ATPase-dead mutant | / | / | / | CPD-seq | |
| GSM4339213-Rad26_K328R_UV_2hr | / | Saccharomyces cerevisiae | UV | Rad26 ATPase-dead mutant | / | / | / | CPD-seq | |
| GSM4339214-rad26spt4_UV_0hr | / | Saccharomyces cerevisiae | UV | RAD26 SPT4 double deletion | / | / | / | CPD-seq | |
| GSM4339215-rad26spt4_UV_2hr | / | Saccharomyces cerevisiae | UV | RAD26 SPT4 double deletion | / | / | / | CPD-seq | |
| GSM4339216-rad26spt4_UV_0hr_repeat | / | Saccharomyces cerevisiae | UV | RAD26 SPT4 double deletion | / | / | / | CPD-seq | |
| GSM4339217-rad26spt4_UV_2hr_repeat | / | Saccharomyces cerevisiae | UV | RAD26 SPT4 double deletion | / | / | / | CPD-seq | |
| GSM4339218-rad26rad16_UV_0hr | / | Saccharomyces cerevisiae | UV | RAD26 RAD16 double deletion | / | / | / | CPD-seq | |
| GSM4339219-rad26rad16_UV_2hr | / | Saccharomyces cerevisiae | UV | RAD26 RAD16 double deletion | / | / | / | CPD-seq | |
| GSM4339220-rad3_K48R_UV_0hr | / | Saccharomyces cerevisiae | UV | TFIIH (Rad3) helicase-dead mutant | / | / | / | CPD-seq | |
| GSM4339221-rad3_K48R_UV_2hr | / | Saccharomyces cerevisiae | UV | TFIIH (Rad3) helicase-dead mutant | / | / | / | CPD-seq |
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