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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE161930
PMID:
34001524
Technique Type:
CPD-seq
Publication:
Distinct roles for RSC and SWI/SNF chromatin remodelers in genomic excision repair
First Author:
Kaitlynne A Bohm
Last Author:
John J Wyrick
Year:
2021
Journal:
Genome Research
Access Link:
Samples ( 23 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM4923450-WTNoUV_A1_1bp | / | Saccharomyces cerevisiae | NT | WT | / | / | / | CPD-seq | |
| GSM4923451-WT_0hrUV_A2_1bp | / | Saccharomyces cerevisiae | UV | WT | / | / | / | CPD-seq | |
| GSM4923452-WT_2hrUV_A3_1bp | / | Saccharomyces cerevisiae | UV | WT | / | / | / | CPD-seq | |
| GSM4923453-snf5_0hrUV_A2_1bp | / | Saccharomyces cerevisiae | UV | snf5Δ | / | / | / | CPD-seq | |
| GSM4923454-snf5_2hrUV_A3_1bp | / | Saccharomyces cerevisiae | UV | snf5Δ | / | / | / | CPD-seq | |
| GSM4923455-snf5_NoUV_A1_1bp | / | Saccharomyces cerevisiae | NT | snf5Δ | / | / | / | CPD-seq | |
| GSM4923456-snf6_0hrUV_comb_1bp | / | Saccharomyces cerevisiae | UV | snf6Δ | / | / | / | CPD-seq | |
| GSM4923457-snf6_2hrUV_comb_1bp | / | Saccharomyces cerevisiae | UV | snf6Δ | / | / | / | CPD-seq | |
| GSM4923458-snf6_NoUV_comb_1bp | / | Saccharomyces cerevisiae | NT | snf6Δ | / | / | / | CPD-seq | |
| GSM4923459-rsc2_0hrUV_A4_1bp | / | Saccharomyces cerevisiae | UV | rsc2Δ | / | / | / | CPD-seq | |
| GSM4923460-rsc2_2hrUV_A5_1bp | / | Saccharomyces cerevisiae | UV | rsc2Δ | / | / | / | CPD-seq | |
| GSM4923461-rsc2_NoUV_A3_1bp | / | Saccharomyces cerevisiae | NT | rsc2Δ | / | / | / | CPD-seq | |
| GSM4923462-sth1_0hrUV_A4_1bp | / | Saccharomyces cerevisiae | UV | Sth1-AA | / | / | / | CPD-seq | |
| GSM4923463-sth1_2hrUV_A5_1bp | / | Saccharomyces cerevisiae | UV | Sth1-AA | / | / | / | CPD-seq | |
| GSM4923464-0hr_UV_Sth1_A5 | / | Saccharomyces cerevisiae | UV | Sth1-AA | / | / | / | CPD-seq | |
| GSM4923465-2hr_UV_Sth1_A6 | / | Saccharomyces cerevisiae | UV | Sth1-AA | / | / | / | CPD-seq | |
| GSM4923466-wtAA_UV0hr_A2_1bp | / | Saccharomyces cerevisiae | UV | WT-AA | / | / | / | CPD-seq | |
| GSM4923467-wtAA_UV2hr_A3_1bp | / | Saccharomyces cerevisiae | UV | WT-AA | / | / | / | CPD-seq | |
| GSM4923468-rad16sth1AA_0hrUV_comb_A5_1bp | / | Saccharomyces cerevisiae | UV | rad16Δ Sth1-AA | / | / | / | CPD-seq | |
| GSM4923469-rad16sth1AA_2hrUV_comb_A6_1bp | / | Saccharomyces cerevisiae | UV | rad16Δ Sth1-AA | / | / | / | CPD-seq | |
| GSM4923470-rad16sth1AA_NoUV_comb_A4_1bp | / | Saccharomyces cerevisiae | NT | rad16Δ Sth1-AA | / | / | / | CPD-seq | |
| GSM4923471-rad16wtAA_0hrUV_A2_1bp | / | Saccharomyces cerevisiae | UV | rad16Δ WT-AA | / | / | / | CPD-seq | |
| GSM4923472-rad16wtAA_2hrUV_A3_1b | / | Saccharomyces cerevisiae | UV | rad16Δ WT-AA | / | / | / | CPD-seq |
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