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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE58808
PMID:
25609572
Technique Type:
Break-seq
Publication:
Break-seq reveals hydroxyurea-induced chromosome fragility as a result of unscheduled conflict between DNA replication and transcription
First Author:
Elizabeth A Hoffman
Last Author:
Wenyi Feng
Year:
2015
Journal:
Genome Research
Access Link:
Samples ( 13 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM1419917-mec1_G1_from_Exp_A_digested_with_BamHI | / | Saccharomyces cerevisiae | / | / | / | G1 | BamHI | Break-seq | |
| GSM1419918-mec1_HU_1h_from_Exp_A | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | / | / | Break-seq | |
| GSM1419919-mec1_HU_1h_from_Exp_B | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | / | / | Break-seq | |
| GSM1419920-mec1_R_1h_from_Exp_A | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | / | / | Break-seq | |
| GSM1419921-mec1_R_1h_from_Exp_B | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | / | / | Break-seq | |
| GSM1419922-MEC1_WT_HU_1h_from_Exp_C | / | Saccharomyces cerevisiae | Hydroxyurea | WT | / | / | / | Break-seq | |
| GSM1419923-MEC1_WT_R_1h_from_Exp_C | / | Saccharomyces cerevisiae | Hydroxyurea | WT | / | / | / | Break-seq | |
| GSM1551296-mec1_HU_1h_from_Control_Exp_mock_labeling | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | / | / | Break-seq | |
| GSM1551297-mec1_HU_1h_from_Control_Exp | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | / | / | Break-seq | |
| GSM1551298-mec1_G1_from_Control_Exp | / | Saccharomyces cerevisiae | Hydroxyurea | / | / | G1 | / | Break-seq | |
| GSM1551299-MEC1_WT_HU_1h_from_Control_Exp_mock_labeling | / | Saccharomyces cerevisiae | Hydroxyurea | WT | / | / | / | Break-seq | |
| GSM1551300-MEC1_WT_HU_1h_from_Control_Exp | / | Saccharomyces cerevisiae | Hydroxyurea | WT | / | / | / | Break-seq | |
| GSM1551301-MEC1_WT_G1_from_Control_Exp | / | Saccharomyces cerevisiae | Hydroxyurea | WT | / | G1 | / | Break-seq |
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