DNA Damage Atlas



Basic Information

Dataset ID:

  PRJNA668241


PMID:

  35471583


Technique Type:

  HTGTS + PEM-seq


Publication:

  C‐terminal deletion‐induced condensation sequesters AID from IgH targets in immunodeficiency


First Author:

  Xia Xie


Last Author:

  Jiazhi Hu


Year:

  2022


Journal:

  EMBO Journal


Access Link:   

Samples ( 21 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
SRX14757205-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AIDcry_3d_5Bio_Iu_replicate3primary B cellMus musculusLPS + IL4 + AicdacryAicda-/-//5’-IµHTGTS
SRX14757204-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AIDcry_3d_5Bio_Iu_replicate2primary B cellMus musculusLPS + IL4 + AicdacryAicda-/-//5’-IµHTGTS
SRX14757203-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_EV_3d_5Bio_Iu_replicate2primary B cellMus musculusLPS + IL4 + EV controlAicda-/-//5’-IµHTGTS
SRX14757202-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_EV_3d_5Bio_Iu_replicate1primary B cellMus musculusLPS + IL4 + EV controlAicda-/-//5’-IµHTGTS
SRX14757201-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AIDcry_3d_5Bio_Iu_replicate1primary B cellMus musculusLPS + IL4 + AicdacryAicda-/-//5’-IµHTGTS
SRX14757200-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AIDR190X_3d_5Bio_Iu_replicate3primary B cellMus musculusLPS + IL4 + AicdaR190XAicda-/-//5’-IµHTGTS
SRX14757199-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AIDR190X_3d_5Bio_Iu_replicate2primary B cellMus musculusLPS + IL4 + AicdaR190XAicda-/-//5’-IµHTGTS
SRX14757198-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AIDR190X_3d_5Bio_Iu_replicate1primary B cellMus musculusLPS + IL4 + AicdaR190XAicda-/-//5’-IµHTGTS
SRX14757197-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AID_3d_5Bio_Iu_replicate3primary B cellMus musculusLPS + IL4 + AIDAicda-/-//5’-IµHTGTS
SRX14757196-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AID_3d_5Bio_Iu_replicate2primary B cellMus musculusLPS + IL4 + AIDAicda-/-//5’-IµHTGTS
SRX14757195-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_AID_3d_5Bio_Iu_replicate1primary B cellMus musculusLPS + IL4 + AIDAicda-/-//5’-IµHTGTS
SRX14757194-HTGTS_of_PrimaryB_Aicda-KO_LPS_IL4_EV_3d_5Bio_Iu_replicate3primary B cellMus musculusLPS + IL4 + EV controlAicda-/-//5’-IµHTGTS
SRX9268664-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AID_replicate1CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268665-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AID_replicate2CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268666-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AID_replicate3CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268667-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AIDR190X_replicate1CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268668-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AIDR190X_replicate2CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268669-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AIDR190X_replicate3CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268670-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AIDcry_replicate1CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268671-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AIDcry_replicate2CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq
SRX9268673-PEM_seq_of_CH12F3_Aicda-KO_CRISPR_guided_AIDcry_replicate3CH12F3Mus musculustransfected with plasmidsAicda-/-//Iγ3PEM-seq


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