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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
PRJNA758251
PMID:
34644584
Technique Type:
PEM-seq
Publication:
RAG2 abolishes RAG1 aggregation to facilitate V(D)J recombination
First Author:
Tingting Gan
Last Author:
Jiazhi Hu
Year:
2021
Journal:
Cell Report
Access Link:
Samples ( 45 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| SRX11980418-PEM-seq_293T-CJ_ctrl_R1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980419-PEM-seq_293T-CJ_RAG1_R1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 | PEM-seq | |
| SRX11980420-PEM-seq_293T-CJ_FUS_tag_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980421-PEM-seq_293T-CJ_hRAG1-plus-hRAG2_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980422-PEM-seq_293T-CJ_hRAG1-FUS-plus-hRAG2_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980423-PEM-seq_293T-CJ_hRAG1-FUSmut-plus-hRAG2_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980424-PEM-seq_293T-CJ_hRAG1-plus-hRAG2-FUS_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980425-PEM-seq_293T-CJ_hRAG1-plus-hRAG2-FUSmut_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980426-PEM-seq_293T-CJ_hRAG1-FUS-plus-hRAG2-FUS_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980427-PEM-seq_293T-CJ_ctrl_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980428-PEM-seq_293T-CJ_FUS_tag_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980429-PEM-seq_293T-CJ_hRAG1-plus-hRAG2_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980430-PEM-seq_293T-CJ_RAG1-plus-RAG2_R1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980431-PEM-seq_293T-CJ_hRAG1-FUS-plus-hRAG2_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980432-PEM-seq_293T-CJ_hRAG1-FUSmut-plus-hRAG2_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980433-PEM-seq_293T-CJ_hRAG1-plus-hRAG2-FUS_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980434-PEM-seq_293T-CJ_hRAG1-plus-hRAG2-FUSmut_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980435-PEM-seq_293T-CJ_hRAG1-FUS-plus-hRAG2-FUS_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980436-PEM-seq_293T-CJ_vector_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980437-PEM-seq_293T-CJ_RAG1-plus-vector_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 | PEM-seq | |
| SRX11980438-PEM-seq_293T-CJ_RAG1-plus-hRAG2_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980439-PEM-seq_293T-CJ_RAG1-plus-mRAG2_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980440-PEM-seq_293T-CJ_RAG1-plus-zRAG2_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980441-PEM-seq_293T-CJ_ctrl_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980442-PEM-seq_293T-CJ_vector_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980443-PEM-seq_293T-CJ_RAG1-plus-vector_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 | PEM-seq | |
| SRX11980444-PEM-seq_293T-CJ_RAG1-plus-hRAG2_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980445-PEM-seq_293T-CJ_RAG1-plus-mRAG2_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980446-PEM-seq_293T-CJ_RAG1-plus-zRAG2_rep2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980447-PEM-seq_293T-CJ_vector_rep3 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq | |
| SRX11980448-PEM-seq_293T-CJ_RAG1-plus-vector_rep3 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 | PEM-seq | |
| SRX11980449-PEM-seq_293T-CJ_RAG1-plus-hRAG2_rep3 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980450-PEM-seq_293T-CJ_RAG1-plus-mRAG2_rep3 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980451-PEM-seq_293T-CJ_RAG1-plus-zRAG2_rep3 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980452-PEM-seq_293T-CJ_RAG1-GFP | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 | PEM-seq | |
| SRX11980453-PEM-seq_293T-CJ_RAG1-GFP_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 | PEM-seq | |
| SRX11980454-PEM-seq_293T-CJ_RAG1-GFP-plus-RAG2-mCherry_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980455-PEM-seq_293T-CJ_RAG1-GFP-plus-RAG2-mut-mCherry_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980456-PEM-seq_293T-CJ_RAG1-GFP-plus-cRAG2-mCherry_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980457-PEM-seq_293T-CJ_RAG1-GFP-plus-cRAG2-mut-mCherry_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980458-PEM-seq_293T-CJ_RAG1-GFP-plus-RAG2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980459-PEM-seq_293T-CJ_RAG1-plus-RAG2_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980460-PEM-seq_293T-CJ_RAG1-GFP-plus-RAG2_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980461-PEM-seq_293T-CJ_RAG1-GFP-plus-RAG2-mCherry_R2 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | RAG1 and RAG2 | PEM-seq | |
| SRX11980462-PEM-seq_293T-CJ_ctrl_rep1 | 293T | Homo sapiens | transfected with plasmids | DEL-CJ segment integration | / | / | / | PEM-seq |
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