DNA Damage Atlas

ERX1236388-C57BL6_wt

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

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Sample ID:   

ERR1162981


Source Project ID:   

PRJEB11644

Cell Type:   

Sperm


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

WT


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

OxiDIP-Seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr158796785187968214879680319042.55/
chr99542578195426160954259697980.83/
chr171355054913553330135511067633.01/
chrX1434828721434832581434830646289.96/
chrUn_JH5843046835869848691205143.33/
chrUn_JH5843041066371070681068324657.65/
chr31490523291490530851490528274610.98/
chr91153507171153510941153509044605.23/
chrUn_JH5843041033571039291035534552.89/
chr131386070713861155138609604450.63/
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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