DNA Damage Atlas

ERX1236389-C57BL6_gpx5-KO

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

ERR1162982


Source Project ID:   

PRJEB11644

Cell Type:   

Sperm


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

gpx5-/-


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

OxiDIP-Seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1713550545135533741355110715380.5/
chr158796785187968260879680418039.43/
chr99542577695426171954259727555.45/
chr62974756429749098297484155328.62/
chrUn_JH5843041066331070351068294368.93/
chrUn_JH5843041033611039871035564197.86/
chr175315233553152760531525594008.21/
chr31490523271490530851490528264006.89/
chr91153506731153511111153509143919.39/
chr131386070713861166138609533855.15/
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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