DNA Damage Atlas


ERX177101-gH2AX_ChIP




Basic Information

Manual

Sample ID:   

ERR202418


Source Project ID:   

E-MTAB-1241

Cell Type:   

DiVA


Organism:   

Homo sapiens


Treatment:   

4-Hydroxytamoxifen


Treatment Time:   

4hrs


Treatment Dose:   

300nM


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

ChIP-seq (anti-γH2AX)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr178004487480044877/206.291/
chr178047287780472880/206.291/
chr222078543520785438/206.291/
chr82334200123342004/206.291/
chr10133200563133200566/160.449/
chr1110319092110319095/137.527/
chr11414268914142692/137.527/
chr146351250763512510/137.527/
chr156863425068634253/137.527/
chr176224174962241752/137.527/
Download the Full Peak List




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