DNA Damage Atlas


GSM1378429-Cas9_RAG1A_OTChr12_SRep3




Basic Information

Manual

Sample ID:   

SRR1270058


Source Project ID:   

GSE57283

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

CaPO4 transfection;nuclease delivery: Cas9:RAG1A


Treatment Time:   

48hrs


Genotype:   

WT


Targeted break:   

47.0mb


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr71129303271129309511129305609435.09-
chr81436266491436270741436268586995.05-
chr173754209037542582375423666279.43-
chr71559304131559323881559311564929-
chr176806899680799568074864733.57-
chr157574551675747793757466594710.47-
chr147858239878584156785832884078.45-
chr22406205102406207252406207234066.89-
chr191417014141925814175394026.41-
chr203557718355815735579333983.51+
Download the Full Peak List



Motif Analysis

Manual





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