DNA Damage Atlas


GSM1414763-WT-aCD40-IL4-Rep2




Basic Information

Manual

Sample ID:   

SRR1423994


Source Project ID:   

GSE58599

Cell Type:   

Splenic IgM+ B cell


Organism:   

Mus musculus


Strain:   

129sv


Treatment:   

anti-CD40/IL4


Genotype:   

WT


Targeted break:   

c-myc intron one


Layout:   

SINGLE


Instrument model:   

454 GS FLX Titanium


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr121134251751134261031134251756760.04+
chr121133366851133374261133366852974.54+
chr121132755361132775161132755362911.45+
chr156209893162099244620989312166.76+
chr156213145862131700621314582101.85+
chr96009088060091084600908801662.25+
chr96947622469476428694762241662.25+
chr156224868262248890622486901630.28+
chr156157763861577847615776381622.48+
chr67072371570723947707239151461.63-
Download the Full Peak List



Motif Analysis

Manual





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