DNA Damage Atlas


GSM1499703-Cas9_RAG1B_A549_SRep1a




Basic Information

Manual

Sample ID:   

SRR1569828


Source Project ID:   

GSE57283

Cell Type:   

A549


Organism:   

Homo sapiens


Treatment:   

CaPO4 transfection;nuclease delivery: Cas9:RAG1B


Treatment Time:   

48hrs


Genotype:   

WT


Targeted break:   

RAG1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1136590984365974183659483046976.5-
chr1489054783890554958905507018711.7+
chrX4117505411770641175052967.86+
chr116353402063534224635342202924.22-
chr193613432436134528361343242924.22+
chr145402749054027695540276952909.95-
chr41205607641205611691205609642454.9-
chr114338593343386334433861331983.51-
chr118600061286000813860008121978.57-
chr141025400181025402191025400181978.57+
Download the Full Peak List



Motif Analysis

Manual





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