DNA Damage Atlas


GSM1499713-Cas9_RAG1BplusATM_TALEN_SRep3




Basic Information

Manual

Sample ID:   

SRR1569838


Source Project ID:   

GSE57283

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

CaPO4 transfection;nuclease delivery: Cas9:RAG1B+ATM_TALEN


Treatment Time:   

48hrs


Genotype:   

WT


Targeted break:   

RAG1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr111351629213518474135175591974.72-
chr114113255741132999411327871941.77-
chr61165705631165711841165708691917.97+
chr113673245136732991367327801848.87-
chr115927923759279758592795431781.82+
chr16535557865357937653564901715.18-
chr111510677215108290151072741684.64-
chr154425986344260925442605691583.33+
chr214068826040690622406889871475.7+
chr148905337589056936890550701451.02+
Download the Full Peak List



Motif Analysis

Manual





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