DNA Damage Atlas


GSM1499725-ATM_TALEN_1ugplusCas9_RAG1B_SRep2




Basic Information

Manual

Sample ID:   

SRR1569850


Source Project ID:   

GSE57283

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

CaPO4 transfection;nuclease delivery: ATM_TALEN;RAG1B


Treatment Time:   

48hrs


Treatment Dose:   

ATM_TALEN_1ug


Genotype:   

WT


Targeted break:   

ATM


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr113659238036597498365948365416.08+
chr105989146259891928598917023644.06-
chr111351715613518068135175563614.45+
chr111074180101074184671074182253551.89+
chr111082393861082407241082400053228.88+
chr16535569565358653653564873098.35+
chr167102138071023786710227193020.37+
chr111031830721031838661031836372987.9+
chr113227706432277500322772852691.99+
chr111292465731292483131292475682626.42-
Download the Full Peak List



Motif Analysis

Manual





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