DNA Damage Atlas

GSM1505391-pol2-4_rnh201_KK-107

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR1575904


Source Project ID:   

GSE61464

Organism:   

Saccharomyces cerevisiae


Genotype:   

pol2-4 rnh201 (KK-107)


Layout:   

SINGLE


Instrument model:   

Illumina MiSeq


Technique:   

Ribose-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXIII666746666751666751427746-
chrM668826688766887128324-
chrM609146092160916122213+
chrM351133511935114106937+
chrM18169181741817499807.5-
chrM37296373013729799807.5-
chrM39683396883968899807.5-
chrVII33255233255733255299807.5+
chrVII98991298992798991699807.5+
chrM41895419024189791660+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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