DNA Damage Atlas

GSM1505392-pol3-5DV_rnh201_KK-120

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR1575905


Source Project ID:   

GSE61464

Organism:   

Saccharomyces cerevisiae


Genotype:   

pol3-5DV rnh201 (KK-120)


Layout:   

SINGLE


Instrument model:   

Illumina MiSeq


Technique:   

Ribose-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXIII666746666752666751768890-
chrIV241889241894241894375323-
chrVII332552332557332552250215+
chrM185281853318533203300-
chrM191521915719157203300-
chrXI599126599131599126203300+
chrXIII408852408858408852182448+
chrM266912669626696172023-
chrM590705907559070172023+
chrVI222801222806222801140746+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab