DNA Damage Atlas


GSM1825004-γSµ_53BP1-KO_5prime_rep1-re




Basic Information

Manual

Sample ID:   

SRR2104728


Source Project ID:   

GSE71005

Cell Type:   

Spleen B cell


Organism:   

Mus musculus


Treatment:   

resequencing of rep1


Genotype:   

gamma-S-mu, 53BP1-/-


Targeted break:   

delta-S-mu


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1240893553408939264089372116136.1+
chr121030799821030801841030799846421.54+
chr124252405425262342524236188.25+
chr127899683978997046789970394762.49-
chr128055327880553652805534474716.91+
chr126500476365004969650047694281.86+
chr121085490211085493911085491894206.98+
chr123602952236029724360297224109.79-
chr122508981925090024250900193796.54-
chr127825367782556978255673339.2-
Download the Full Peak List



Motif Analysis

Manual





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