DNA Damage Atlas


GSM1825025-5primeSµ_H2AX-KO_5prime_rep2




Basic Information

Manual

Sample ID:   

SRR2104749


Source Project ID:   

GSE71005

Cell Type:   

Spleen B cell


Organism:   

Mus musculus


Treatment:   

cytokine stimulation


Genotype:   

delta-S-gamma-1_2xI, H2AX-/-


Targeted break:   

5'S-mu


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1210552458710552500210552474219823.5+
chr1241514955415153694151511519576.3+
chr1240893550408939274089372117716.6+
chr1293576816935773899357714510377.1-
chr121674765016748086167479137472.76-
chr128055327480553651805534476913.79+
chr121028927871028931961028929636870.74+
chr124252407425262542524236351.85+
chr121030798121030801861030799846206.99+
chr121172609601172611621172609625645.27+
Download the Full Peak List



Motif Analysis

Manual





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