DNA Damage Atlas


GSM1917778-ATMKO_ISceI_ExpD




Basic Information

Manual

Sample ID:   

SRR2820387


Source Project ID:   

GSE74356

Cell Type:   

Neural stem/progenitor cells


Organism:   

Mus musculus


Strain:   

129SVE


Treatment:   

Triamcinolone acetonide


Genotype:   

ATM-/-R26I-SceI-GRc-myc25xI-SceI


Targeted break:   

25xI-SceI-c-Myc


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr144581281245813015458128141197.55+
chr11726634547266365572663454907.097+
chr7130591436130591640130591636893.757-
chr7904419759044217990441975893.757+
chr13113470527113470903113470729808.185-
chrX124154658124154893124154658775.857+
chr15614329276143321261432927639.742+
chr11520866525208685352086852604.731-
chr14717262077172640871726207604.731+
chr15545808415458104254580841604.731+
Download the Full Peak List



Motif Analysis

Manual





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