DNA Damage Atlas


GSM1917790-WT_Chr12_sgRNA_1_ExpC




Basic Information

Manual

Sample ID:   

SRR2820399


Source Project ID:   

GSE74356

Cell Type:   

NSPCs


Organism:   

Mus musculus


Strain:   

129SVE


Treatment:   

NT


Genotype:   

WT


Targeted break:   

Chr12_sgRNA_1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr11229731762297337722973177759.097+
chr1192660313192660514192660513759.097-
chr17337981233800133379813759.097+
chr10945924329459263494592434755.339+
chr18429138104291401242914010755.339-
chr19323066303230683232306630755.339+
chr5805008578050105980500857755.339+
chr6133169958133170161133169958751.619+
chr5142681540142681744142681540747.934+
chr7113755398113755602113755598747.934-
Download the Full Peak List



Motif Analysis

Manual





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