DNA Damage Atlas


GSM1917795-WT_Chr12_sgRNA_1_APH_ExpA




Basic Information

Manual

Sample ID:   

SRR2820404


Source Project ID:   

GSE74356

Cell Type:   

NSPCs


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Aphidicolin


Genotype:   

WT


Targeted break:   

Chr12_sgRNA_1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr178370598383706184837061831763.45-
chr144581281245813015458128151746.07+
chr79044197390442176904419761746.07+
chr15722337557223580572235761729.04-
chr21807238818072589180725891322.59-
chr11824720051824722111824722051290.48-
chr169368671293686922936867121265.9+
chr10115984064115984265115984264881.723-
chr11229731752297337622973175881.723+
chr1194037517194037718194037517881.723+
Download the Full Peak List



Motif Analysis

Manual





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