DNA Damage Atlas


GSM1917811-X4p53_Chr12_sgRNA_1_DMSO_ExpB




Basic Information

Manual

Sample ID:   

SRR2820420


Source Project ID:   

GSE74356

Cell Type:   

NSPCs


Organism:   

Mus musculus


Strain:   

129SVE


Treatment:   

DMSO


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

Chr12_sgRNA_1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1111791962111792165111791965897.974+
chr15998499769985019199849976847.855+
chr12783333278335337833533725.528-
chr19382666133826681438266613725.528+
chr5276053182760552027605318721.936+
chr5365276313652783336527631721.936+
chr11317401331742163174013718.38+
chr17637186596371886263718862718.38-
chr3882760098827621288276212718.38-
chr7481785548180584817855718.38+
Download the Full Peak List



Motif Analysis

Manual





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