DNA Damage Atlas


GSM1917839-X4p53_Chr15_Myc_sgRNA_ExpC




Basic Information

Manual

Sample ID:   

SRR2820460


Source Project ID:   

GSE74356

Cell Type:   

NSPCs


Organism:   

Mus musculus


Strain:   

129SVE


Treatment:   

NT


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

Chr15_Myc_sgRNA


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr11817067471817069711817069711018.17-
chr3530668435306704953066843885.713+
chr17255699512557056025570360823.902+
chr5104072320104072522104072320677.439+
chr9946561789465638094656380677.439-
chr1181902385181902588181902385674.101+
chr5669798356698004166979835664.284+
chr15622747756227500862274775587.307+
chr11789235277892555178924775585.953-
chr14861989448619919186198991554.019+
Download the Full Peak List



Motif Analysis

Manual





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