DNA Damage Atlas


GSM1917854-X4p53_Chr16_sgRNA_2_DMSO_ExpA




Basic Information

Manual

Sample ID:   

SRR2820478


Source Project ID:   

GSE74356

Cell Type:   

NSPCs


Organism:   

Mus musculus


Strain:   

129SVE


Treatment:   

DMSO


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

Chr16_sgRNA_2


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr159490885794912745949108701572.12-
chr143468139334681596346813961115.2+
chr66061363760613843606138381098.96-
chr6108931563108931764108931764844.721-
chr8797219787972217979721978844.721+
chr18193567741935698019356980824.218-
chr10119189046119189263119189046782.437+
chr6156818061568202815682006764.815-
chr6745315787453182474531578690.199+
chr8513729651375455137496681.883-
Download the Full Peak List



Motif Analysis

Manual





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