DNA Damage Atlas


GSM1954838-B6fX13Rm_antiDMC1_SSDS




Basic Information

Manual

Sample ID:   

SRR2961458


Source Project ID:   

GSE75419

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

maternal strain: C57BL/6J; paternal strain: B10.F-H2pb1/(13R)J


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-DMC1)


Others:   

control: GSM1954851-B6fX13Rm_Input_SSDS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX42580406425839904258198714.7469+
chrX71379011713825097138081414.2047-
chr950664164506677035066540413.5483+
chrX16653419016653796816653642212.9844-
chrX97076272970797309707763912.4928+
chrX42214776422174894221595712.4821+
chr614058966814059291914059155411.974-
chrX52952603529561515295430211.8637+
chrX86748702867534298674971711.5158-
chrX78202137822927782265711.3114-
Download the Full Peak List



Motif Analysis

Manual





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