DNA Damage Atlas


GSM1954846-CAST_antiDMC1_SSDS




Basic Information

Manual

Sample ID:   

SRR2961475 , SRR2961476 , SRR2961477


Source Project ID:   

GSE75419

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

maternal strain: CAST/EiJ; paternal strain: CAST/EiJ


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-DMC1)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX1034927921034983861034935996.74025-
chr17552568775530025755262346.4815-
chr31443638261443677311443641876.40386-
chr53326536133269884332680806.24504-
chrX7180848718543471824185.98973-
chr35865709158660720586581715.81978-
chr11880839361880883111880841825.76033+
chr121090403191090442271090410435.60322+
chr61373682781373723411373709775.29379-
chr114962464349629246496254005.29203+
Download the Full Peak List



Motif Analysis

Manual





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