DNA Damage Atlas


GSM1954847-CASTfX13Rm_antiDMC1_SSDS




Basic Information

Manual

Sample ID:   

SRR2961478


Source Project ID:   

GSE75419

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

maternal strain: CAST/EiJ; paternal strain: B10.F-H2pb1/(13R)J


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-DMC1)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX73523482735289097352852118.8546-
chrX78198157823479782265712.4801-
chr1856780872567846545678424911.364-
chrX97076164970800489707763910.6795+
chr1942633974267656426738110.3552-
chr64934239749345699493447949.83761+
chr184696462346966967469647139.59419+
chrX8674952386754026867497179.48894-
chr95066418250667710506654048.49916+
chrX4258012442584661425819878.48155+
Download the Full Peak List



Motif Analysis

Manual





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