DNA Damage Atlas


GSM1954862-PWDfXCASTm_antiDMC1_SSDS




Basic Information

Manual

Sample ID:   

SRR2961513


Source Project ID:   

GSE75419

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

maternal strain: PWD/PhJ; paternal strain: CAST/EiJ


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-DMC1)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr118354582218354943418354598811.4102+
chr531072144310765583107540611.3911-
chrX10349339110349838710349359911.219-
chr314436379814436753014436418710.896-
chr533264674332704213326808010.8844-
chr1149624697496293514962540010.7053+
chr1942631714267788426738110.434-
chr17552532075530029755262349.68562-
chr121090403451090447501090410439.56398+
chr61373678101373724021373709779.41384-
Download the Full Peak List



Motif Analysis

Manual





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