DNA Damage Atlas

GSM2068753-EcoRV_restriction_enzyme

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR3182237


Source Project ID:   

GSE78172

Cell Type:   

HeLa


Organism:   

Homo sapiens


Targeted break:   

EcoRV


Layout:   

SINGLE


Instrument model:   

Illumina MiSeq


Technique:   

DSBCapture


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_gl00022442494250/158664/
chr9_gl000199_random5153051531/157816/
chrUn_gl0002241688616887/157695/
chrUn_gl0002258746987470/90327.5/
chrUn_gl0002259848098481/84814.6/
chrUn_gl000214123363123364/74333.9/
chrUn_gl000214129646129647/72274.1/
chrUn_gl000216150131150132/52100.4/
chrUn_gl000214117212117213/51312.8/
chrUn_gl0002432183421835/47738.5/
Download the Full Peak List


Visualization

Manual





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