DNA Damage Atlas


GSM2133294-CEBPAminusDOX_gH2AX_ChIPseq




Basic Information

Manual

Sample ID:   

SRR3441332


Source Project ID:   

GSE80682

Cell Type:   

Transformed B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

NT + Dox-inducible CEBPA vector


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-γH2AX)


Others:   

control: GSM2133296-CEBPAminusDOX_input_ChIPseq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr132373860023740199237393997.40054/
chr91010976001010979991010977995.03802/
chr132204080022041399220410994.8122/
chr15378420053785199537846994.70775/
chr124022200040223799402228994.70144/
chr111168518001168541991168529994.67971/
chr132362080023622799236217994.45874/
chr132355480023556399235555994.26954/
chr71100182001100191991100186994.2142/
chr172948840029494999294916994.20717/
Download the Full Peak List



Motif Analysis

Manual





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