DNA Damage Atlas


GSM2263220-spo0_1




Basic Information

Manual

Sample ID:   

SRR4005228


Source Project ID:   

GSE85253

Organism:   

Saccharomyces cerevisiae


Strain:   

SKY4121


Genotype:   

spo11-Y135F


Harvested Time:   

meiotic time-point: 0 h


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

S1-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM18798223971933713802-
chrIV0314811177.2+
chrIII089920610943.8+
chrVI46824976471510935.2+
chrM0166241533210674.9-
chrM2345929438236198280.23+
chrXII1119411512111997704.56+
chrM3791768789619437198.28-
chrM3309037109344815514.46+
chrXII4595994607534605004842.61-
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrM18801223971933710513.9-
chrM016621153328526.86-
chrM2346129438236197158.6+
chrIV030786746.16+
chrIII08992066643.58+
chrVI4684497647156488.55+
chrM3791768788619436374.52-
chrM3309137109344815588.03+
chrXII4595994607534605005154.73-
chrXII1119411512111994820.96+
Download the Full Merged Peak List



Motif Analysis

Manual





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