DNA Damage Atlas


GSM2396680-TK2-M1V-KCl




Basic Information

Manual

Sample ID:   

SRR5035924


Source Project ID:   

GSE90054

Cell Type:   

Patient-derived fibroblast cell


Organism:   

Homo sapiens


Treatment:   

KCl


Treatment Time:   

2hrs


Treatment Dose:   

0.3 M


Genotype:   

TK2 p.M1V (homozygous)


Layout:   

PAIRED


Instrument model:   

NextSeq 500


Technique:   

HydEn-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr16678973446789755367897350906.401+
chrX111175481111175684111175683522.663-
chr6459209954592168545921338291.322-
chr18382505563825094238250637218.898+
chrX149362542149362744149362742204.37-
chr7104946098104946587104946101201.984+
chr8910657519106595291065751140.124+
chr12790296147902981779029614138.743+
chr18223322202233242422332422132.389-
chr10175937881759424017594039122.916+
Download the Full Peak List



Motif Analysis

Manual





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