DNA Damage Atlas


GSM2572684-gH2AX_ChIPSeq_Induced




Basic Information

Manual

Sample ID:   

SRR5441982


Source Project ID:   

GSE97589

Cell Type:   

DiVA


Organism:   

Homo sapiens


Treatment:   

4-Hydroxytamoxifen


Treatment Time:   

300nM


Treatment Dose:   

4hrs


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

ChIP-seq (anti-γH2AX)


Others:   

control: GSM2572686-gH2AX_input_DNA_Induced


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr107971672579716728/167.769/
chr2228173944228173947/167.769/
chr116366013163660134/153.789/
chr121331060613310609/125.827/
chr178047287780472880/125.827/
chr192953906029539063/125.827/
chr2155562658155562661/125.827/
chr72577186225771865/125.827/
chr8122709914122709917/125.827/
chr88994861489948617/125.827/
Download the Full Peak List




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