DNA Damage Atlas

GSM2572685-gH2AX_ChIPSeq_Uninduced

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR5441983


Source Project ID:   

GSE97589

Cell Type:   

DiVA


Organism:   

Homo sapiens


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

ChIP-seq (anti-γH2AX)


Others:   

control: GSM2572687-gH2AX_input_DNA_Uninduced


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr156911212269112125/208.544/
chr3192183792192183795/208.544/
chr740342254034228/208.544/
chr146972226769722270/191.165/
chr222579298425792987/191.165/
chr107658490576584908/156.408/
chr116886877868868781/156.408/
chr121315471913154722/156.408/
chr1218020491802052/156.408/
chr2174412258174412261/156.408/
Download the Full Peak List


Visualization

Manual





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