DNA Damage Atlas


GSM2630044-WPMY-1_control_2




Basic Information

Manual

Sample ID:   

SRR5572782


Source Project ID:   

GSE99011

Cell Type:   

WPMY-1


Organism:   

Homo sapiens


Strain:   

CRL-2854


Genotype:   

WT


Spike-in percentage:   

2 μg DNA fragments + 15 pg spike_in sequences


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

dU-seq


Others:   

control:GSM2630042-WPMY-1_input_2


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9_gl000199_random15549815613215592626.9441/
chrUn_gl00022630793532330420.1119/
chr9_gl000199_random49710499784984315.5811/
chr9_gl000199_random82755831368294413.949/
chrUn_gl00022014354814397714376112.3883/
chrUn_gl00022618192130197312.2062/
rDNA39193395163935311.7527/
chr21288887471288890431288888947.69486/
chrUn_gl0002146427565260650697.32248/
chr51125437811254751112545637.1241/
Download the Full Peak List



Motif Analysis

Manual





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