DNA Damage Atlas


GSM2630061-UNGKO_PD_1




Basic Information

Manual

Sample ID:   

SRR5572799


Source Project ID:   

GSE99011

Cell Type:   

293T


Organism:   

Homo sapiens


Strain:   

CRL-3216


Genotype:   

UNG-/-


Spike-in percentage:   

2 μg DNA fragments + 15 pg spike_in sequences


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

dU-seq


Others:   

control:GSM2630053-UNGKO_input_1


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9_gl000199_random91068920949187227.6416/
chr9_gl000199_random82751831548295723.6119/
chr9_gl000199_random92535933249275014.8981/
chr9_gl000199_random83967849558436513.7858/
chr9_gl000199_random72799731537297511.5954/
chr9_gl000199_random1491441495201493318.43583/
chrUn_gl0002201326391331951329487.04711/
rDNA4027540965407696.21935/
chr9_gl000199_random5071551408512345.92319/
chr136273206962734475627339784.34269/
Download the Full Peak List



Motif Analysis

Manual





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