DNA Damage Atlas

GSM2679394-160615_ACP18-D57N-KOH-160310

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR5740745


Source Project ID:   

GSE100352

Organism:   

Saccharomyces cerevisiae


Treatment:   

KOH


Genotype:   

D57N TRP


Layout:   

PAIRED


Instrument model:   

NextSeq 500


Technique:   

HydEn-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrIII113201002427+
chrXVI5994752563741719.23+
chrXI6290664843639431635.33+
chrM5912162287597591613.57-
chrXII1064117106571710650741338.58-
chrII5122749058821302.51+
chrV5693175710945704501240.93-
chrM7904780376800411150.1-
chrX7132457161307153731143.53-
chrXV1083692108515410847701139.76-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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