DNA Damage Atlas

GSM2701530-SK1_x_S288C_6h_sample

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR5820971


Source Project ID:   

GSE101339

Organism:   

Saccharomyces cerevisiae


Genotype:   

WT


Harvested Time:   

collected at 6 hr after transfer to sporulation medium


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

SPO11-oligo


Others:   

epitope tag: Spo11-Flag


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrVI9462196747957993834.55+
chrXIV4264834280764271242578.01+
chrIV8347968368548359362382.45-
chrVIII5160055180335173502323.93+
chrVII6087796109326101672068.69-
chrXVI8122598136148129961669.21+
chrV2604128062273021639.37+
chrXII3223443238853231891570.19-
chrIX2673862693912680871501.71+
chrI1980771994561986791471.69+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab