DNA Damage Atlas


GSM2891685-gH2AX_U2OS_AsiS1_IP




Basic Information

Manual

Sample ID:   

SRR6491547


Source Project ID:   

GSE108172

Cell Type:   

U2OS


Organism:   

Homo sapiens


Treatment:   

Doxycycline


Treatment Time:   

72hrs


Treatment Dose:   

2mg/mL


Genotype:   

shASF


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 4000


Technique:   

ChIP-seq (anti-γH2AX)


Others:   

control: GSM2891684-gH2AX_U2OS_AsiS1_Inp


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1923028792302882/671.127/
chr1924559942455997/619.502/
chr121315471913154722/567.877/
chr173802439138024394/567.877/
chr1110319092110319095/516.251/
chr13114894660114894663/516.251/
chr176483151364831516/516.251/
chr222078543520785438/490.439/
chr1110036701110036704/464.626/
chr173825640638256409/413.001/
Download the Full Peak List




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