DNA Damage Atlas


GSM2974253-WTZT0LIVER_rep2




Basic Information

Manual

Sample ID:   

SRR6659144


Source Project ID:   

GSE109938

Cell Type:   

Liver


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Cisplatin


Treatment Dose:   

10 mg cisplatin/kg


Genotype:   

WT


Harvested Time:   

zeitgeber time: 0


Layout:   

SINGLE


Instrument model:   

illumina HiSeq 2500


Technique:   

XR-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr91244388301244433621244401987.28389/
chr4_GL456216_random3007236649336556.77433/
chr54323154843236727432338586.63184/
chr21044920811044958241044944376.19389/
chr157624563276252126762478566.03819/
chr109541324295419100954168115.52112/
chr101396341513969241139658515.48595/
chr146275859262763276627604925.47914/
chr26012344860127385601251735.41613/
chr195566321557305055681715.32398/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr4_GL456216_random3007236100336557.37547/
chr91244388371244433221244401987.36022/
chr54323164843236277432338587.35797/
chr26012373760126654601251737.11377/
chr155978346559785244597842726.91817/
chr158158438781588256815861286.80593/
chr157624608576251860762478566.69909/
chr127822515578228499782262326.49071/
chr191279418412797462127951176.47587/
chr31428808581428830581428817716.46161/
Download the Full Merged Peak List



Motif Analysis

Manual





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