DNA Damage Atlas

GSM2983128-pol2-M644L_rnh201_rad1_rev3_rep1

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR6678032


Source Project ID:   

GSE110241

Cell Type:   

whole yeast culture


Organism:   

Saccharomyces cerevisiae


Genotype:   

pol2-M644L rnh201 rad1 rev3


Layout:   

PAIRED


Instrument model:   

NextSeq 500


Technique:   

HydEn-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXV114642116156115361991.056-
chrX713266716181715341919.87-
chrXI629026474263676903.618+
chrXVI577175856374797.208+
chrV569345571136570450657.294-
chrVII528837530567529801618.67+
chrXV108370110853961084687616.811-
chrXIII474866715644601.126+
chrII507574795694590.235+
chrXV11006157564.632+
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrXVI586675086374919.159+
chrXV114646116065115361891.302-
chrX713266716145715341814.084-
chrXIII480063105644779.276+
chrXI629796471463676735.089+
chrV569372571091570450710.754-
chrXV108372210853361084687681.393-
chrXV31006157666.387+
chrII518074795694655.411+
chrXV217659218963218245649.124+
Download the Full Merged Peak List


Visualization

Manual



Motif Analysis

Manual





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