DNA Damage Atlas


GSM3182668-MCF10AsiSIER_DRB_XRCC4_chip




Basic Information

Manual

Sample ID:   

SRR7289044


Source Project ID:   

GSE93038

Cell Type:   

MCF-10A


Organism:   

Homo sapiens


Treatment:   

DRB


Treatment Time:   

20mM


Treatment Dose:   

30min


Genotype:   

MCF10A-AsiSIER


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

ChIP-seq (anti-XRCC4)


Others:   

control: GSM2442939-MCF10AsiSIER_INPUT_chip


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr109405101694051019/227.941/
chr1224032649224032652/213.695/
chr1228328082228328085/185.202/
chr12768724827687251/128.217/
chr133425628034256283/128.217/
chr149587432795874330/128.217/
chr159817215981724/128.217/
chr165696641156966414/128.217/
chr2120124567120124570/128.217/
chr3196594983196594986/128.217/
Download the Full Peak List




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