Sample Detail

Basic Information

Manual

Sample ID:

SRR7290887

Source Project ID:

GSE115625

Cell Type:

MEF

Organism:

Mus musculus

Treatment:

ATR-45 inhibitor + Aphidicolin

Treatment Time:

18hrs

Treatment Dose:

1uM + 0.2uM

Genotype:

ATR^+/- Bcl-xL-expressing

Layout:

SINGLE

Instrument model:

Illumina HiSeq 2500

Technique:

BrITL

Others:

control: GSM3185294-MEFs_ATRi-plus-APH_18h_Input

Fastqc:

Genome Browser

Manual

link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)

Distribution

Manual

Genomic distribution	Repeat distribution

Quantification

Manual

Peak Intensity

Top 10 Peaks

Chromosome	Start	End	Summit	Intensity	Strand
rDNA	42693	43480	43216	200.322	/
rDNA	5571	9355	6910	162.727	/
rDNA	9722	12474	10691	146.046	/
rDNA	0	1182	198	124.529	/
rDNA	43938	45300	45104	119.965	/
rDNA	3121	3509	3341	118.238	/
rDNA	4965	5205	5105	115.065	/
rDNA	12731	15312	12921	111.454	/
rDNA	1912	3015	2860	111.094	/
rDNA	1309	1735	1521	106.99	/

Download the Full Peak List

Overlapped Peaks from Replicates

Average Peak Intensity

Top 10 Merged Peaks

Chromosome	Start	End	Summit	Intensity	Strand
rDNA	42960	43388	43216	239.025	/
rDNA	6041	9354	6910	170.977	/
rDNA	9722	12474	10691	146.046	/
rDNA	25	1168	198	128.778	/
rDNA	3121	3493	3341	123.324	/
rDNA	4973	5197	5105	123.284	/
rDNA	43958	45292	45104	122.46	/
rDNA	12731	15031	12921	119.301	/
rDNA	1921	3015	2860	112.008	/
rDNA	1312	1722	1521	111.165	/

Download the Full Merged Peak List

Visualization

Manual

Profile

Heatmap

Download the matrix file

Motif Analysis

Manual

Download