DNA Damage Atlas


GSM3227962-EU5_EdU_seq_aB_28h_HU_28h_0.5mM_rep1




Basic Information

Manual

Sample ID:   

SRR7440345


Source Project ID:   

GSE116316

Cell Type:   

Activated primary B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Hydroxyurea


Treatment Time:   

28 hours


Treatment Dose:   

0.5mM


Genotype:   

WT


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

EdU-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM06528371961.3433/
rDNA24861269902598122.2402/
rDNA41908437814224121.613/
rDNA076013819.5092/
chrX14348294014348317714348305711.5917/
rDNA38633411203935911.3713/
rDNA6207878669399.91604/
rDNA3573036002358657.57508/
chrUn_GL4563922202822855221646.15533/
chr11710783971710788831710786755.73586/
Download the Full Peak List



Motif Analysis

Manual





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