DNA Damage Atlas


GSM3351207-SSDS_Prdm9-KO_Adult




Basic Information

Manual

Sample ID:   

SRR7739681


Source Project ID:   

GSE118913

Cell Type:   

Testis


Organism:   

Mus musculus


Genotype:   

Prdm9-/-


Harvested Time:   

age: Adult


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-DMC1)


Others:   

control: GSM3351208-IgS_SSDS_wildtype_testis_Adult


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr153919558539200531391981208.64545+
chr52094873220953640209511506.68207-
chr22096600120971002209681336.41488-
chr58420679842494484226716.40789+
chrX4214676342152943421504026.30004+
chr173113200311720131153405.99-
chrX1078143361078182461078165135.88208+
chr187866763787175478699915.77064-
chr126919507569199293691985465.76158+
chr48864915886779288662505.72884-
Download the Full Peak List



Motif Analysis

Manual





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