DNA Damage Atlas


GSM3375198-EMX1-acrIIA4-1-0-figure6C-rep1




Basic Information

Manual

Sample ID:   

SRR7785000


Source Project ID:   

GSE116231

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

CaPO4


Treatment Time:   

48hrs


Targeted break:   

EMX1


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2000


Technique:   

PEM-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1544108514441106024410976371658.6-
chr221984484321984529421984507268261.2-
chr545358029453604274535906758534.6+
chr1568132212681327956813263232126.6-
chr812880103012880147212880125827276-
chr592269359227371922716222713.6-
chr1152479555248320524815512976.1-
chr121269712981269715031269712986301.03+
chr48287831782878529828785256092.98-
chr23329760633297808332976065328.84+
Download the Full Peak List



Motif Analysis

Manual





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